PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_46335
Common NameKK1_047056
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 157aa    MW: 17983.7 Da    PI: 9.0592
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_46335genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.94.8e-10147755
                   HHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
            HLH  7 erErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                   ++Er+RR++++  f++L +++P++   +s+   s  +   + ++YIksLq
  C.cajan_46335  1 MIERNRRNQMKALFSKLNSVVPHQ---SSREaISRPDLIDEGTNYIKSLQ 47
                   69*********************8...56666*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF000108.4E-7147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.893146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.83E-6151No hitNo description
Gene3DG3DSA:4.10.280.102.3E-10160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.8E-12163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MIERNRRNQM KALFSKLNSV VPHQSSREAI SRPDLIDEGT NYIKSLQIKL EKMKEKRSNL  60
LESKMSENAS MSMGLKSPQF KIQQMGSVLE VVLVTGLDFQ FMFNETIRVL QEEGSDVANA  120
SYTVIENEVF HTIHCQVGES ANATLRISEK LKKFLYH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003528456.26e-90PREDICTED: uncharacterized protein LOC100810793
TrEMBLA0A151QPR71e-113A0A151QPR7_CAJCA; Transcription factor bHLH125 family
STRINGGLYMA13G24730.21e-84(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-41bHLH family protein